| Mon, 06 Mar 2023 12:54:27 -0800 |
Dmitriy Morozov |
Fix doc/conf.py
default tip
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files
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| Mon, 06 Mar 2023 12:48:28 -0800 |
Dmitriy Morozov |
Change all http to https in doc/get-build-install.rst
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files
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| Mon, 06 Mar 2023 12:43:45 -0800 |
Dmitriy Morozov |
Disable building e/a/alphashapes2d-periodic
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files
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| Mon, 06 Mar 2023 12:31:30 -0800 |
Dmitriy Morozov |
Fix a few compilation issues
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files
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| Sun, 24 Nov 2019 13:35:45 -0800 |
Dmitriy Morozov |
Add .build.yml
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files
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| Sun, 24 Nov 2019 13:27:13 -0800 |
Dmitriy Morozov |
Make dionysus-link depend on dionysus
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files
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| Sun, 24 Nov 2019 08:11:18 -0800 |
Dmitriy Morozov |
Comment out explicit typedefs to make GCC happy
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files
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| Sat, 23 Nov 2019 21:40:40 -0800 |
Dmitriy Morozov |
Use boost/next_prior.hpp with Boost >= 1.67
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files
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| Sat, 23 Nov 2019 21:29:50 -0800 |
Dmitriy Morozov |
Get rid of Boost.Signals dependency
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files
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| Mon, 27 Nov 2017 10:26:59 -0800 |
Dmitriy Morozov |
Add CGAL pre-4.11 support back to e/a/alphashapes3d-periodic
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files
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| Sun, 26 Nov 2017 18:42:36 -0800 |
Dmitriy Morozov |
Vanessa's fix for e/a/alphashapes3d-periodic for CGAL 4.11
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files
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| Sun, 26 Nov 2017 12:07:49 -0800 |
Dmitriy Morozov |
Add Vanessa Robins' periodic alpha shapes 2D code
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files
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| Thu, 07 Sep 2017 17:35:28 -0700 |
Dmitriy Morozov |
Add Vanessa Robins' periodic alpha shapes code
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files
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| Fri, 14 Jul 2017 14:07:05 -0700 |
Dmitriy Morozov |
Add a note about Dionysus 2 to the docs
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files
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| Fri, 14 Jul 2017 14:04:13 -0700 |
Dmitriy Morozov |
Merge
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files
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| Sun, 27 Apr 2014 13:49:14 -0700 |
Dmitriy Morozov |
Added a practical guide slides and examples to the docs
dev
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files
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| Tue, 27 Jun 2017 09:38:20 -0700 |
Dmitriy Morozov |
Remove 'hg up tip' from doc/get-build-install.rst
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files
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| Tue, 27 Jun 2017 09:37:05 -0700 |
Dmitriy Morozov |
Merge dev into default, to avoid the need for 'hg up tip' after clone
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files
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| Sun, 16 Apr 2017 13:35:24 -0700 |
Dmitriy Morozov |
Add LICENSE + LEGAL
dev
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files
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| Mon, 22 Aug 2016 11:17:45 -0700 |
Dmitriy Morozov |
Add register_ptr_to_python to PersistenceDiagram bindings to match changes in Boost.Python
dev
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files
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| Mon, 05 Oct 2015 09:02:38 -0700 |
Dmitriy Morozov |
Fix compilation with Boost 1.58 (load_construct_data_adl error)
dev
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files
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| Mon, 02 Mar 2015 13:20:51 +0100 |
Arnur Nigmetov |
Added executable to compute Wasserstein distance.
dev
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files
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| Fri, 06 Dec 2013 19:09:12 -0800 |
Dmitriy Morozov |
Disabled glibcxx specific concept checks
dev
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files
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| Fri, 06 Dec 2013 19:02:42 -0800 |
Dmitriy Morozov |
Dave Millman's fix for and rlog problem
dev
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files
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| Wed, 16 Oct 2013 09:58:02 -0700 |
Dmitriy Morozov |
Increase template depth to fix a bug with XCode 5
dev
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files
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| Fri, 09 Aug 2013 15:08:23 -0700 |
Dmitriy Morozov |
Brit Fasy's fix to compile with logging=on
dev
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files
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| Wed, 10 Jul 2013 14:39:29 -0700 |
Dmitriy Morozov |
lscubes.py output infinite pairs + small bugfix
dev
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files
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| Mon, 10 Jun 2013 17:25:57 +0200 |
Dmitriy Morozov |
Fixed non-POD array problem in homology-zigzags
dev
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files
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| Mon, 10 Jun 2013 16:58:01 +0200 |
Dmitriy Morozov |
Added homology zigzags by Steve Oudot and Don Sheehy
dev
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files
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| Fri, 26 Apr 2013 22:31:58 -0700 |
Dmitriy Morozov |
Added standalone bottleneck-distance.cpp
dev
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files
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| Thu, 28 Feb 2013 11:12:02 +0800 |
Dmitriy Morozov |
Dave Millman's fixes to compile with LLVM-based compilers
dev
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files
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| Fri, 26 Oct 2012 11:45:58 -0700 |
Dmitriy Morozov |
Added CGAL_USE_FILE + added option use_cgal
dev
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files
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| Sun, 10 Jun 2012 18:54:26 -0700 |
Dmitriy Morozov |
Bug in show_diagram() with empty diagrams
dev
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files
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| Sun, 10 Jun 2012 11:26:38 -0700 |
Dmitriy Morozov |
subcomplex in show_complex() + pan/zoom in ComplexViewer2D
dev
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files
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| Sat, 09 Jun 2012 12:56:36 -0700 |
Dmitriy Morozov |
DiagramViewer can show multiple diagrams at once
dev
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files
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| Sat, 09 Jun 2012 12:17:17 -0700 |
Dmitriy Morozov |
CohomologyPersistence returns dying cocycles + StaticCohomologyPersistence records them and normalizes coefficients + minor changes
dev
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files
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| Fri, 08 Jun 2012 15:40:09 -0700 |
Dmitriy Morozov |
Display lists in ComplexViewer3D + circular.smooth() raises exceptions
dev
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files
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| Thu, 07 Jun 2012 21:36:53 -0700 |
Dmitriy Morozov |
Set center and radius in ComplexViewer3D
dev
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files
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| Thu, 07 Jun 2012 21:21:11 -0700 |
Dmitriy Morozov |
Points at infinity in DiagramViewer
dev
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files
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| Thu, 07 Jun 2012 21:16:06 -0700 |
Dmitriy Morozov |
Fixed scale points in the diagram + noise filtering
dev
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files
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| Thu, 07 Jun 2012 11:57:33 -0700 |
Dmitriy Morozov |
Added pan + zoom to diagram viewer; show_diagram() didn't return; added PyQt, PyOpenGL, NumPy as dependencies in the docs
dev
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files
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| Thu, 07 Jun 2012 10:52:15 -0700 |
Dmitriy Morozov |
Straightened out QApplication problems (made it global)
dev
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files
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| Thu, 07 Jun 2012 10:11:01 -0700 |
Dmitriy Morozov |
Started show_complex_3D()
dev
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files
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| Wed, 06 Jun 2012 23:15:57 -0700 |
Dmitriy Morozov |
Fixed bugs in diagram.py and adaptor.py + added coloring of points in show_complex_2D(); Filtration can be initialized from iterator without comparison
dev
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files
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| Tue, 05 Jun 2012 17:53:08 -0700 |
Dmitriy Morozov |
Added viewer.show_complex_2D + center points in the persistence diagram
dev
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files
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| Tue, 05 Jun 2012 17:04:10 -0700 |
Dmitriy Morozov |
Moved dionysus.circular into its own subdirectory + added dionysus.viewer
dev
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files
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| Tue, 05 Jun 2012 14:50:58 -0700 |
Dmitriy Morozov |
Added docs for StaticCohomologyPersistence + ImagePersistence + circular.smooth + minor fixes in adaptor.py
dev
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files
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| Mon, 04 Jun 2012 09:05:45 -0700 |
Dmitriy Morozov |
Added smooth() to Python binding + fixed a bug in adaptor.py
dev
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files
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| Sun, 03 Jun 2012 16:39:18 -0700 |
Dmitriy Morozov |
Merged upstream
dev
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files
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| Sun, 03 Jun 2012 16:17:27 -0700 |
Dmitriy Morozov |
Added adaptor for StaticCohomologyPersistence and ImagePersistence
dev
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files
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| Mon, 14 May 2012 10:47:46 -0700 |
Dmitriy Morozov |
Added a note about reducing matrix Z in i/t/zigzag-persistence.hpp
dev
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files
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| Fri, 11 May 2012 17:06:55 -0700 |
Dmitriy Morozov |
Merge
dev
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files
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| Fri, 11 May 2012 10:25:57 -0700 |
Dmitriy Morozov |
Added store_negative argument to StaticPersistence.pair_simpices()
dev
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files
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| Thu, 10 May 2012 15:52:53 -0700 |
Dmitriy Morozov |
Added a note about wasserstein_distance() to documentation + cleaned up docs for init_diagrams()
dev
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files
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| Thu, 10 May 2012 15:46:52 -0700 |
Dmitriy Morozov |
Inlcuded munkres.cpp from munkres.h + matrix.cpp -> matrix.hpp
dev
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files
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| Thu, 10 May 2012 15:42:21 -0700 |
Dmitriy Morozov |
Added wasserstein_distance()
dev
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files
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| Thu, 10 May 2012 14:24:40 -0700 |
Dmitriy Morozov |
Exposed init_diagrams() to Python
dev
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files
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| Tue, 08 May 2012 13:07:28 -0700 |
Dmitriy Morozov |
Minor changes to compile with GCC 4.7
dev
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files
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| Mon, 25 Jul 2011 23:21:29 -0700 |
Dmitriy Morozov |
Added cohomology/candidates counter to i/t/cohomology-persistence.hpp
dev
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files
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| Fri, 06 May 2011 10:38:06 -0700 |
Dmitriy Morozov |
Minor fixes in tools/draw-diagram
dev
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files
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| Tue, 05 Apr 2011 18:29:50 -0700 |
Dmitriy Morozov |
alphashapes2d can handle degenerate inputs (thanks to Taras Galkovskyi for the bug report and the fix)
dev
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files
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| Fri, 28 Jan 2011 08:01:37 -0800 |
Dmitriy Morozov |
Fixed combinations in closure() for older versions of Python
dev
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files
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| Fri, 07 Jan 2011 23:11:46 -0800 |
Dmitriy Morozov |
closure() in Python can handle simplex data
dev
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files
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| Mon, 20 Dec 2010 11:21:57 -0800 |
Dmitriy Morozov |
Fixed a typo in b/p/persistence-diagram.cpp
dev
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files
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| Wed, 08 Dec 2010 10:29:26 -0800 |
Dmitriy Morozov |
Added a note about GPL to the documentation
dev
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files
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| Fri, 03 Dec 2010 11:26:12 -0800 |
Dmitriy Morozov |
Cleaned up CMake files to play nice with CGAL
dev
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files
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| Sat, 09 Oct 2010 13:56:26 -0700 |
Dmitriy Morozov |
Cleaned up PersistenceDiagram bindings
dev
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files
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| Mon, 04 Oct 2010 18:03:35 -0700 |
Dmitriy Morozov |
Fixed a link to SYNAPS
dev
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files
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| Tue, 14 Sep 2010 15:36:13 -0700 |
Dmitriy Morozov |
Merged in Python bindings for DynamicPersistenceChains
dev
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files
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| Tue, 14 Sep 2010 15:00:34 -0700 |
Dmitriy Morozov |
Added documentation for DynamicPersistenceChains
dev
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files
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| Sun, 12 Sep 2010 09:55:44 -0700 |
Dmitriy Morozov |
Added Python bindings for DynamicPersistenceChains
dev
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files
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| Tue, 14 Sep 2010 11:34:11 -0700 |
Dmitriy Morozov |
Added the ability to pickle Simplex class in Python
dev
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files
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| Tue, 14 Sep 2010 11:12:33 -0700 |
Dmitriy Morozov |
Added ability to iterate over ZigzagPersistence cycles in Python
dev
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files
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| Fri, 10 Sep 2010 21:21:27 -0700 |
Dmitriy Morozov |
Fixed a typo in the documentation of SPNode.cycle
dev
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files
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| Tue, 07 Sep 2010 13:54:53 -0700 |
Dmitriy Morozov |
Added Python closure function (for computing a k-skeleton of a closure of a list of simplices)
dev
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files
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| Thu, 02 Sep 2010 09:13:42 -0700 |
Dmitriy Morozov |
Removed the unnecessary typename in filtration-homology.cpp
dev
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files
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| Mon, 30 Aug 2010 12:28:58 -0700 |
Dmitriy Morozov |
Added output of essential cycles for any given input filtration
dev
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files
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| Wed, 25 Aug 2010 14:36:11 -0700 |
Dmitriy Morozov |
Minor touches in documentation
dev
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files
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| Wed, 25 Aug 2010 14:31:36 -0700 |
Dmitriy Morozov |
Merged docs with upstream
dev
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files
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| Thu, 15 Jul 2010 10:25:08 -0700 |
Dmitriy Morozov |
CGAL is unncessary for vineyards (update in the documentation)
dev
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files
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| Wed, 25 Aug 2010 14:29:54 -0700 |
Dmitriy Morozov |
Merged in Aravind's changes
dev
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files
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| Wed, 18 Aug 2010 15:35:48 -0700 |
Aravindakshan Babu |
Changed the first iterator of PersistenceDiagram to accept dimension as well. Modified documentation.
dev
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files
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| Wed, 18 Aug 2010 12:05:18 -0700 |
Aravindakshan Babu |
Removed the points iterator in PersistenceDaigram; replaced it with a __iter__ method.
dev
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files
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| Tue, 17 Aug 2010 22:19:19 -0700 |
Aravindakshan Babu |
Added documentation for the python classes Point and PersistenceDiagram. Removed the __sub__ method for PersistenceDiagram. Minor renaming.
dev
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files
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| Wed, 11 Aug 2010 17:07:09 -0700 |
Aravindakshan Babu |
Added a __iter__ method to the PersistenceDiagram class in python. Renamed the points iterator to the intervals iterator.
dev
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files
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| Thu, 08 Jul 2010 23:50:39 -0700 |
Aravindakshan Babu |
Added extra functionality to Point class( an iterator ) and PersistenceDiagram( dimension property and __len__ func ).
dev
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files
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| Fri, 02 Jul 2010 17:08:02 -0700 |
Aravindakshan Babu |
Made the data argument in Point's __init__method to be an optional argument by making it a boost::python::optional.
dev
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files
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| Fri, 02 Jul 2010 04:19:29 -0700 |
Aravindakshan Babu |
Added code to expose the persistence_diagram class, the bottleneck_distance function and the point class to python.
dev
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files
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| Thu, 15 Jul 2010 10:20:06 -0700 |
Dmitriy Morozov |
Merged docs with upstream
dev
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files
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| Thu, 15 Jul 2010 10:19:18 -0700 |
Dmitriy Morozov |
Removed the warning about compiler versions (seems unnecessary after Andrew's fixes)
dev
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files
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| Mon, 12 Jul 2010 09:53:30 -0700 |
Dmitriy Morozov |
Fixed path for lsfiltration.py
dev
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files
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| Mon, 05 Jul 2010 23:51:26 -0700 |
Dmitriy Morozov |
Bug in the tutorial: simplices = [] -> simplices = Filtration()
dev
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files
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| Tue, 13 Apr 2010 09:09:04 -0700 |
Dmitriy Morozov |
More typos in the docs
dev
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files
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| Mon, 12 Apr 2010 19:01:01 -0700 |
Dmitriy Morozov |
Fixed a link: dionysis -> dionysus
dev
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files
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| Tue, 20 Apr 2010 13:58:23 -0700 |
Dmitriy Morozov |
Andrew Yarmola's fix to the in-class intialization syntax in OrderList<T>
dev
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files
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| Tue, 09 Mar 2010 15:22:57 -0800 |
Dmitriy Morozov |
Added Persistence::initialize(f) + fixed minor bug LinearKernel::sign_at_negative_infinity()
dev
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files
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| Sat, 06 Mar 2010 14:39:15 -0800 |
Dmitriy Morozov |
Added insert-at-the-end optimization for CohomologyPersistence::add_cocycle()
dev
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files
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| Fri, 05 Mar 2010 09:26:54 -0800 |
Dmitriy Morozov |
Count cocycles in CohomologyPersistence
dev
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files
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| Tue, 23 Feb 2010 17:39:15 -0800 |
Mikael Vejdemo Johansson |
Andrew Yarmola's compilation fix for MacOSX.
dev
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files
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| Mon, 22 Feb 2010 17:24:02 -0800 |
Dmitriy Morozov |
Removed unused instrumentation of cohomology and unnecessary includes
dev
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files
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| Tue, 09 Feb 2010 11:05:48 -0800 |
Dmitriy Morozov |
Removed reference to reference in ThreeOutcomeComparison
dev
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files
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| Sun, 07 Feb 2010 21:10:54 -0800 |
Dmitriy Morozov |
Made EventQueue into a binary heap (for efficiency and sanity)
dev
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files
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| Sun, 07 Feb 2010 10:46:23 -0800 |
Dmitriy Morozov |
Replaced list with multi_index representation in EventQueue making it more efficient
dev
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files
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| Sat, 06 Feb 2010 23:22:43 -0800 |
Dmitriy Morozov |
Switched to internal KineticSort
dev
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files
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| Fri, 05 Feb 2010 11:49:52 -0800 |
Dmitriy Morozov |
Added linear kernel for my own KineticSort
dev
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files
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| Fri, 05 Feb 2010 11:07:42 -0800 |
Dmitriy Morozov |
Commented out QField to get rid of the artifical dependence on GMP
dev
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files
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| Thu, 04 Feb 2010 23:43:36 -0800 |
Dmitriy Morozov |
Fixed non-copyable temporary bug
dev
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files
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| Wed, 03 Feb 2010 14:51:38 -0800 |
Dmitriy Morozov |
Fixed the duplicates (degeneracy) and another assertion problem in LSVineyard
dev
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files
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| Wed, 03 Feb 2010 11:20:40 -0800 |
Dmitriy Morozov |
Removed a buggy assertion in LSVineard::transpose_vertices() (j points at the end() when moving the last simplex of the filtration)
dev
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files
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| Tue, 02 Feb 2010 23:43:46 -0800 |
Dmitriy Morozov |
StaticPersistence::pair_simplices() has an option to not display progress (LSVineyard uses it during consistency checking)
dev
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files
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| Tue, 26 Jan 2010 11:14:50 -0800 |
Dmitriy Morozov |
Added rips-explicit-cohomology
dev
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files
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| Tue, 26 Jan 2010 11:00:51 -0800 |
Dmitriy Morozov |
Moved lsfiltration.py into examples/pl-functions + added lscubes.py example (cubical lower-star filtration)
dev
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files
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| Tue, 12 Jan 2010 14:36:38 -0800 |
Dmitriy Morozov |
Fixed Python constructor of CohomologyPersistence + minor changes to cocycle.py
dev
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files
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| Mon, 11 Jan 2010 10:21:37 -0800 |
Dmitriy Morozov |
vertex_coface -> vertex_cofaces in Rips documentation (in Python)
dev
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files
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| Sat, 09 Jan 2010 15:03:52 -0800 |
Dmitriy Morozov |
Henry Adams' fixes to python/dionysus/zigzag.py + added CohomologyPersistence.show_cocycles method
dev
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files
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| Thu, 07 Jan 2010 10:27:18 -0800 |
Dmitriy Morozov |
CohomologyPersistence::add returns the dying cocycle
dev
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files
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| Tue, 05 Jan 2010 11:02:07 -0800 |
Dmitriy Morozov |
Check Boost version in include/utilities/property-maps.h + minor changes to cocycle.py
dev
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files
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| Thu, 31 Dec 2009 11:28:49 -0800 |
Dmitriy Morozov |
Added pl-vineyard documentation
dev
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files
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| Fri, 25 Dec 2009 06:56:27 -0800 |
Dmitriy Morozov |
Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
dev
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files
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| Sun, 20 Dec 2009 10:43:00 -0800 |
Dmitriy Morozov |
Moved files around: lsvineyard.h -> include/topology, examples/grid -> examples/pl-functions
dev
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files
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| Sun, 20 Dec 2009 08:27:01 -0800 |
Dmitriy Morozov |
Merged Vineyards code changes with the main development line
dev
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files
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| Sun, 20 Dec 2009 07:45:29 -0800 |
Dmitriy Morozov |
Python bindings work again
dev
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files
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| Wed, 16 Dec 2009 15:39:38 -0800 |
Dmitriy Morozov |
Created pl-vineyard.cpp to compute vineyards given a complex and a sequence of values at each vertex
dev
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files
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| Wed, 16 Dec 2009 15:39:06 -0800 |
Dmitriy Morozov |
Resurrected vineyard code:
dev
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files
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| Thu, 03 Dec 2009 13:21:23 -0800 |
Dmitriy Morozov |
Made storing negative simplices in StaticPersistence parameter-based, so that DynamicPersistence works again
dev
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files
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| Wed, 02 Dec 2009 14:03:54 -0800 |
Dmitriy Morozov |
StaticPersistence operates on chains consisting of only positive simplices
dev
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files
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| Tue, 01 Dec 2009 20:34:31 -0800 |
Dmitriy Morozov |
alphashapes3d.cpp measures persistence time
dev
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files
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| Sat, 28 Nov 2009 17:01:52 -0800 |
Dmitriy Morozov |
Fixed DynamicPersistenceTrails::PairingTrailsVisitor to match the changes in StaticPersistence::PairVisitor
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files
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| Sat, 28 Nov 2009 16:45:42 -0800 |
Dmitriy Morozov |
Instrumented code for counting:
dev
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files
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| Fri, 06 Nov 2009 14:19:08 -0800 |
Dmitriy Morozov |
Added arbitrary coefficients in boundaries (to C++ and Python) + cleaned up CohomologyPersistence.add overloading in Python
dev
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files
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| Wed, 28 Oct 2009 14:38:36 -0700 |
Dmitriy Morozov |
Added image persistence functionality to CohomologyPersistence
dev
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files
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| Fri, 23 Oct 2009 11:51:23 -0700 |
Dmitriy Morozov |
Added draw.py under tools/draw-diagram
dev
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files
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| Fri, 23 Oct 2009 09:36:55 -0700 |
Dmitriy Morozov |
Added link to CVXOPT in get-build-install documentation + progress bar to rips-pairwise-cohomology
dev
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files
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| Tue, 20 Oct 2009 22:05:23 -0700 |
Dmitriy Morozov |
Fixed a typo in documentation + added a warning and a tip about GCC 4.2 on a Mac
dev
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files
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| Mon, 31 Aug 2009 13:45:28 -0700 |
mridul |
The if-else cases in lsqr.py were not exhaustive. They become exhaustive by changing ab > aa to ab >= aa.
dev
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files
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| Mon, 31 Aug 2009 10:51:56 -0700 |
Dmitriy Morozov |
Removed Qt4 requirement + added link to download and tutorial to the front page of the documentation
dev
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| Fri, 21 Aug 2009 14:26:56 -0700 |
Dmitriy Morozov |
Exposed store argument to CohomologyPersistence.add() in Python
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| Wed, 19 Aug 2009 12:01:47 -0700 |
Dmitriy Morozov |
cocycle.py uses vertex list, and does not make any assumptions about the vertex-simplex order
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| Thu, 13 Aug 2009 13:16:15 -0700 |
Dmitriy Morozov |
Consistency zigzag outputs intervals supported over a single complex
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| Wed, 12 Aug 2009 21:32:38 -0700 |
Camille Wormser |
explicitely converts a Dimension (short int) into a size_t, for removing a warning
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| Wed, 12 Aug 2009 07:16:35 -0700 |
Camille Wormser |
Removing unused parameter names in order to avoid warnings
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| Wed, 12 Aug 2009 11:32:42 -0700 |
Dmitriy Morozov |
make-zigzag-subsamples.py doesn't output the union, rips-consistency-zigzag.cpp fixed show_progress
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| Mon, 10 Aug 2009 16:48:13 -0700 |
Dmitriy Morozov |
Fixed bugs in cocycle.py introduced when rips-pairwise-cohomology.py was originally added
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| Mon, 10 Aug 2009 15:22:32 -0700 |
Dmitriy Morozov |
Fixed bugs in rips-pairwise-cohomology.py whose origin is unclear to me
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| Tue, 04 Aug 2009 17:12:47 -0700 |
Dmitriy Morozov |
Merged in Chris' changes
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| Tue, 04 Aug 2009 16:58:44 -0700 |
Christos Mantoulidis |
Modified cohomology code (unweighted and weighted) so that it doesn't use std::map for boundary computations, which should optimize memory usage.
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| Tue, 04 Aug 2009 13:23:16 -0700 |
Christos Mantoulidis |
Changed implementation of WeightedRips to store simplex values (max distance between simplices' vertices) as an invisible layer on top of each simplex object, so that the data() field of WeightedRips has been freed for use by the users again.
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| Tue, 28 Jul 2009 15:04:06 -0700 |
Christos Mantoulidis |
Added rips-weighted-cohomology, and channeled WeightedRips logging to the same channel as Rips
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| Tue, 28 Jul 2009 11:42:03 -0700 |
Christos Mantoulidis |
Merged upstream
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| Tue, 28 Jul 2009 10:58:53 -0700 |
Christos Mantoulidis |
Modified WeightedRips::generate() to incorporate the simplex-appearance-value computation (before it would have to be done explicitly by the user by a for-loop after the call to generate())
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| Mon, 27 Jul 2009 21:42:51 -0700 |
Christos Mantoulidis |
added logging to WeightedRips (still needs debugging)
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| Mon, 13 Jul 2009 19:44:04 -0700 |
Christos Mantoulidis |
Updated weighted rips libraries to make use of OOP--now WeightedRips inherits from Rips. It is possible that logging for WeightedRips does not work.
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| Thu, 02 Jul 2009 15:42:44 -0700 |
Christos Mantoulidis |
Added weighted rips code and libraries
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| Tue, 04 Aug 2009 14:28:17 -0700 |
Dmitriy Morozov |
Simplices are deleted from the complex after removal in triangle-zigzag.py + touched up documentation (to mention CohomologyPersistence better)
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| Tue, 28 Jul 2009 13:27:13 -0700 |
Dmitriy Morozov |
Consistency zigzag outputs intervals for dimensions less than the skeleton dimension only
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| Thu, 30 Jul 2009 10:35:49 -0700 |
Dmitriy Morozov |
Switched PairwiseDistances in Python bindings to C++
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| Thu, 30 Jul 2009 10:23:31 -0700 |
Dmitriy Morozov |
Added Python bindings for CohomologyPersistence (+ example + documentation)
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| Fri, 24 Jul 2009 14:18:16 -0700 |
Dmitriy Morozov |
Minor changes in distances.py + rips-pairwise.py wrapped into a main() function
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| Wed, 17 Jun 2009 16:02:52 -0700 |
Dmitriy Morozov |
Disable alphashapes in Python bindings if no CGAL
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| Sun, 17 May 2009 20:05:26 -0700 |
Dmitriy Morozov |
Made ListRandomAccessIterator generic with respect to value, and moved it to utils.h
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| Fri, 24 Jul 2009 11:08:48 -0700 |
Dmitriy Morozov |
Cleaner output in rips-pairwise.cpp + added make-zigzag-subsamples.py + added lsfiltration.py
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| Thu, 09 Jul 2009 07:47:22 -0700 |
Dmitriy Morozov |
Fixed plot.py in tools/plot-values
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| Thu, 14 May 2009 17:43:19 -0700 |
Dmitriy Morozov |
In documentation put contents into sidebar
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| Thu, 09 Jul 2009 02:46:53 -0700 |
Dmitriy Morozov |
Documentation for parametrization using persistent cohomology
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| Thu, 09 Jul 2009 02:42:47 -0700 |
Dmitriy Morozov |
Rips pairwise cohomology produces output necessary for 1-cocycle parametrization
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| Thu, 09 Jul 2009 00:59:32 -0700 |
Dmitriy Morozov |
Added field arithmetic to CohomologyPersistence (Zp + Q)
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| Thu, 14 May 2009 14:04:43 -0700 |
Dmitriy Morozov |
Moved PairwiseDistances and ExplicitDistances into include/geometry/distances.h
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| Thu, 14 May 2009 13:09:06 -0700 |
Dmitriy Morozov |
read_points() does not need ambient dimension and ignores lines starting with '#'
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| Mon, 11 May 2009 12:45:49 -0700 |
Dmitriy Morozov |
Added documentation; for now mostly for the Python bindings
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| Thu, 07 May 2009 14:53:13 -0700 |
Dmitriy Morozov |
Touch up to compile with GCC 4.4
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| Wed, 29 Apr 2009 10:16:03 -0700 |
Dmitriy Morozov |
Cleaned up simplex comparison functions, rip-pairwise.py outputs a diagram, auxilliary add_simplices() + remove_simplices() for zigzags
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| Thu, 16 Apr 2009 00:23:01 -0700 |
Dmitriy Morozov |
Alphashapes and Python bindings
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| Wed, 15 Apr 2009 14:17:21 -0700 |
Dmitriy Morozov |
Placed all Python bindings code into dionysus::python namespace
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| Tue, 14 Apr 2009 14:38:08 -0700 |
Dmitriy Morozov |
Cleaned up Python bindings to restore functionality:
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| Mon, 13 Apr 2009 20:44:31 -0700 |
Dmitriy Morozov |
Renamed header files in bindings/python to get rid of the "python-" prefix
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| Mon, 13 Apr 2009 20:38:46 -0700 |
Dmitriy Morozov |
Changes in Python Bindings:
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| Sat, 11 Apr 2009 10:29:53 -0700 |
Dmitriy Morozov |
Added Python bindings for the Rips complex + an example
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| Fri, 01 May 2009 15:09:38 -0700 |
Dmitriy Morozov |
Cleaned up traits (chain and container) for static- and dynamic-persistence
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| Fri, 01 May 2009 15:36:25 -0700 |
Dmitriy Morozov |
Added tools/extract-diagram + minor fixes
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| Fri, 10 Apr 2009 14:35:43 -0700 |
Dmitriy Morozov |
Added intrusive containers issue and issue filters
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| Thu, 09 Apr 2009 14:43:37 -0700 |
Dmitriy Morozov |
Moved l2distance.h into include/geometry
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| Thu, 09 Apr 2009 14:39:12 -0700 |
Dmitriy Morozov |
Added categories to some of the issues
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| Thu, 09 Apr 2009 12:58:10 -0700 |
Dmitriy Morozov |
Fixed distance to diagonal calculation + added stand-alone bottleneck distance tool
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| Wed, 25 Mar 2009 09:56:52 -0700 |
Dmitriy Morozov |
Added ZigzagPersistence::is_alive() + consistency zigzag outputs betti 1 at each stage
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| Tue, 24 Mar 2009 15:17:39 -0700 |
Dmitriy Morozov |
Added consistency zigzag
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| Mon, 23 Mar 2009 11:40:29 -0700 |
Dmitriy Morozov |
Merged in cohomology branch
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| Fri, 27 Feb 2009 10:14:26 -0800 |
Dmitriy Morozov |
Added CohomologyPersistence and Rips pairwise distances computation
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| Sun, 22 Mar 2009 11:18:07 -0700 |
Dmitriy Morozov |
Added DynamicPersistenceChains (no dynamic part yet)
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| Tue, 03 Feb 2009 11:31:10 -0800 |
Dmitriy Morozov |
Updated Rips zigzags
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| Sat, 31 Jan 2009 23:02:22 -0800 |
Dmitriy Morozov |
Switched Rips complex computation to Bron-Kerbosch algorithm
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| Thu, 29 Jan 2009 10:16:56 -0800 |
Dmitriy Morozov |
Added python bindings for ZigzagPersistence (as well as ImageZigzagPersistence)
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| Wed, 28 Jan 2009 14:57:17 -0800 |
Dmitriy Morozov |
Switched to CGAL 3.4 (native CMake configuration): for now only alphashapes
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| Tue, 20 Jan 2009 10:53:35 -0800 |
Dmitriy Morozov |
Implemented ImageZigzagPersistence
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| Mon, 12 Jan 2009 15:33:04 -0800 |
Dmitriy Morozov |
Debugged ZigzagPersistence (having added heavier consistency checking)
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| Fri, 02 Jan 2009 14:54:15 -0800 |
Dmitriy Morozov |
Added rips-zigzag; in the process caught a number of bugs in ZigzagPersistence (added check_consistency() to it)
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| Wed, 31 Dec 2008 11:54:34 -0800 |
Dmitriy Morozov |
Added DequeChains (for ZigzagPersistence)
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| Wed, 31 Dec 2008 11:51:14 -0800 |
Dmitriy Morozov |
Added ZigzagPersistence
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| Sat, 27 Dec 2008 14:51:38 -0800 |
Dmitriy Morozov |
Merged in Python branch
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| Thu, 25 Dec 2008 13:09:00 -0800 |
Dmitriy Morozov |
Initial commit of Python bindings
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| Thu, 25 Dec 2008 13:08:41 -0800 |
Dmitriy Morozov |
Empty is now a template, replaced RecursiveIterator with boost::counting_iterator
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