Intermediate commit while converting to the new architecture * Converted Filtration into StaticPersistence and DynamicPersistenceTrails (both right now work with the underlying std::vector rather than std::list order) * Filtration is now just an auxilliary glue (a map between Complex and Persistence) * Whether chains are vectors or lists can be interchanged * Added PersistenceDiagram with a simple bottleneck_distance() function * Converted triangle, alphashapes3d, and cech-complex examples * Lots of organizational changes (factoring utilities out into containers.h, indirect.h, property-maps.h) * Trying to document along the way with NaturalDocs-type comments

From: Dmitriy Morozov <morozov@cs.duke.edu>
Date: Fri, 04 Apr 2008 11:18:00
State: fixed
Subject: Switch in the pairing in Case 1.2
Message-Id: <8aa25bcae639fc99-0-artemis@moscow>

If simplex i is unpaired in Case 1.2, while i+1 is paired with l, and R[i,l]=1
there is a switch in the pairing in Case 1.2.