Intermediate commit while converting to the new architecture * Converted Filtration into StaticPersistence and DynamicPersistenceTrails (both right now work with the underlying std::vector rather than std::list order) * Filtration is now just an auxilliary glue (a map between Complex and Persistence) * Whether chains are vectors or lists can be interchanged * Added PersistenceDiagram with a simple bottleneck_distance() function * Converted triangle, alphashapes3d, and cech-complex examples * Lots of organizational changes (factoring utilities out into containers.h, indirect.h, property-maps.h) * Trying to document along the way with NaturalDocs-type comments

From: Dmitriy Morozov <morozov@cs.duke.edu>
Date: Tue, 26 Feb 2008 08:00:50 -0500
Subject: Fixed by adding CGAL_NO_ASSERTIONS
Message-Id: <c420501cc5285bbc-d75d85d67d421f7e-artemis@metatron>
References: <c420501cc5285bbc-0-artemis@metatron>
In-Reply-To: <c420501cc5285bbc-0-artemis@metatron>

I suspect the bug in CGAL (since everything works fine with CGAL_NO_ASSERTIONS
set), so I disabled the offending assertion (and all the rest of them) by
setting a CXX flag in CMakeLists.txt.