Changed SimplexWithVertices<V>::VertexContainer to std::vector<V> from std::set<V>
#include <utilities/sys.h>
#include <utilities/debug.h>
#include "alphashapes3d.h"
#include <topology/filtration.h>
#include <iostream>
#include <fstream>
typedef Filtration<AlphaSimplex3D> AlphaFiltration;
int main(int argc, char** argv)
{
// Read in the point set and compute its Delaunay triangulation
std::istream& in = std::cin;
double x,y,z;
Delaunay Dt;
while(in)
{
in >> x >> y >> z;
Point p(x,y,z);
Dt.insert(p);
}
std::cout << "Delaunay triangulation computed" << std::endl;
AlphaSimplex3DVector alpha_ordering;
fill_alpha_order(Dt, alpha_ordering);
std::cout << "Simplices: " << alpha_ordering.size() << std::endl;
// Create the alpha-shape filtration
AlphaFiltration af;
for (AlphaSimplex3DVector::const_iterator cur = alpha_ordering.begin(); cur != alpha_ordering.end(); ++cur)
af.append(*cur);
af.fill_simplex_index_map();
std::cout << "Filled simplex-index map" << std::endl;
af.pair_simplices(af.begin(), af.end());
std::cout << "Simplices paired" << std::endl;
for (AlphaFiltration::Index i = af.begin(); i != af.end(); ++i)
if (i->is_paired())
{
if (i->sign())
std::cout << i->dimension() << " " << i->value() << " " << i->pair()->value() << std::endl;
} //else std::cout << i->value() << std::endl;
}