Resurrected vineyard code:
* Switched StaticPersistence + (serializable) Filtration to Boost.MultiIndex
* Updated DynamicPersistenceTrails to work with the new MultiIndex way
* Created LSVineyard class, and fixed the grid examples
#include <utilities/log.h>
#include <cmath>
#if LOGGING
static rlog::RLogChannel* rlARFunctionKernel = DEF_CHANNEL("ar/function-kernel", rlog::Log_Debug);
static rlog::RLogChannel* rlARFunctionKernelValue = DEF_CHANNEL("ar/function-kernel/value", rlog::Log_Debug);
#endif
/* For now only rho and phi are implemented */
void
ARFunctionKernel::
solve(const Function& f, RootStack& stack)
{
AssertMsg(stack.empty(), "Stack must be empty before solving");
AssertMsg((f.form() != Function::none) && (f.form2() != Function::none), "Solving possible only for differences");
FunctionForm f1 = f.form(), f2 = f.form2();
const ARSimplex3D *s1 = f.simplex(),
*s2 = f.simplex2();
if (f1 < f2) { std::swap(f1,f2); std::swap(s1,s2); } // for simplicity enforce function order
// to handle fewer cases explicitly
AssertMsg(f1 != Function::lambda && f2 != Function::lambda, "Lambda not implemented yet");
rLog(rlARFunctionKernel, "Solve: function1 = (%i, %p), function2 = (%i, %p)",
f1, s1, f2, s2);
//if (f1 == Function::phi && f2 == Function::phi) return;
//if (f1 == Function::rho && f2 == Function::rho) return;
if (f1 == Function::phi && f2 == Function::rho)
{
SimplexFieldType r = s2->alpha() - s1->phi_const();
rLog(rlARFunctionKernel, " phi = rho => r^2 = %s (%lf)", tostring(r).c_str(), root(r));
stack.push(root(r));
}
if (f1 == Function::phi && f2 == Function::lambda)
{
rLog(rlARFunctionKernel, " phi = lambda");
SimplexFieldType r2 = (s2->rho() + s2->v() - s2->s() - s1->phi_const());
r2 *= r2;
r2 /= 4*s2->v();
r2 += s2->s();
if (r2 >= s2->s() + s2->v())
stack.push(root(r2));
SimplexFieldType r1 = s2->rho() - s1->phi_const();
if (r1 <= s2->s() + s2->v())
stack.push(root(r1));
}
// FIXME: this is far from complete!
if (f1 == Function::lambda && f2 == Function::lambda)
{
rLog(rlARFunctionKernel, " lambda = lambda");
if ((s1->s() + s1->v() < s2->s() + s2->v())) // let f1 be the function with larger break point
{ std::swap(f1,f2); std::swap(s1,s2); }
if (s1->rho() > s2->rho())
{
RootType r = root(s2->s() + s2->v() + s1->rho() - s2->rho()) + 2*sqrt(root(s2->v()*(s1->rho() - s2->rho())));
if (r < root(s1->s() + s1->v()) && r > root(s2->s() + s2->v()))
stack.push(r);
}
}
if (f1 == Function::lambda && f2 == Function::rho)
{
rLog(rlARFunctionKernel, " lambda = rho");
// perhaps no solutions instead of an assertion is the right way to deal with this
AssertMsg(s2->alpha() > s1->rho(), "Rho_0^2 must be greater than Rho^2");
RootType r = sqrt(root(s2->v()*(s2->alpha() - s1->rho()))); // damn square roots
r *= 2;
r += root(s1->s() + s1->v() + s2->alpha() - s1->rho());
}
rLog(rlARFunctionKernel, " Stack size: %i", stack.size());
if (stack.size() > 0) rLog(rlARFunctionKernel, " Top: %lf", stack.top());
}
int
ARFunctionKernel::
sign_at(const Function& f, RootType r)
{
FieldType v = value_at(f,r);
if (v > 0) return true;
else return false;
}
int
ARFunctionKernel::
sign_at_negative_infinity(const Function& f)
{
FunctionForm f1 = f.form(), f2 = f.form2();
const ARSimplex3D *s1 = f.simplex(),
*s2 = f.simplex2();
int multiplier = 1;
if (f1 < f2) { std::swap(f1, f2); std::swap(s1, s2); multiplier = -1; }
AssertMsg(f1 != Function::lambda && f2 != Function::lambda, "Lambda not implemented yet");
if (f1 == Function::phi && f2 == Function::phi)
{
if (s1->phi_const() == s2->phi_const()) return 0;
if (s1->phi_const() > s2->phi_const()) return 1; // multiplier must be 1
else return -1;
}
if (f1 == Function::phi && f2 == Function::rho)
return -multiplier;
if (f1 == Function::rho && f2 == Function::rho)
{
if (s1->alpha() == s2->alpha()) return 0;
if (s1->alpha() > s2->alpha()) return 1; // multiplier must be 1
else return -1;
}
AssertMsg(false, "The case analysis should be exhaustive in sign at -infinity");
return false;
}
ARFunctionKernel::FieldType
ARFunctionKernel::
value_at(const Function& f, RootType v)
{
FunctionForm f1 = f.form(), f2 = f.form2();
ARSimplex3D *s1 = f.simplex(),
*s2 = f.simplex2();
AssertMsg(f2 == Function::none && s2 == 0, "Value_at knows only about functions themselves, not their differences");
AssertMsg(f1 != Function::lambda, "Lambda not implemented yet");
rLog(rlARFunctionKernelValue, "Value_at: function = (%i, %p)", f1, s1);
if (f1 == Function::phi)
return v + root(s1->phi_const());
if (f1 == Function::rho)
return root(s1->alpha());
AssertMsg(false, "The case analysis should be exhaustive in value_at");
return 0;
}