Added code to expose the persistence_diagram class, the bottleneck_distance function and the point class to python.
Most of the commonly used methods for each class have been exported.
The constructor for point now requires that a data argument be provided along with x and y coord. This needs to be made optional.
The constructor for persistence_diagram could possibly be rewritten as well.
#ifndef __AR_FUNCTION_KERNEL_H__
#define __AR_FUNCTION_KERNEL_H__
#include <stack>
#include <iostream>
#include "ar-simplex3d.h"
/**
* Represents function suitable for the FunctionKernel. Albeit very restrictive
* (it only supports subtraction), although that should suffice for KineticSort.
*/
class ARFunction
{
public:
/// Represents the three forms of the involved functions. See Appendix B of LHI paper.
enum FunctionForm { none, rho, lambda, phi };
public:
ARFunction(FunctionForm f, ARSimplex3D* s):
form_(f), form2_(none),
simplex_(s), simplex2_(0) {}
ARFunction(const ARFunction& other):
form_(other.form_), form2_(other.form2_),
simplex_(other.simplex_),
simplex2_(other.simplex2_) {}
ARFunction& operator-=(const ARFunction& other) { form2_ = other.form_; simplex2_ = other.simplex_; return *this; }
ARFunction operator-(const ARFunction& other) { return (ARFunction(*this) -= other); }
FunctionForm form() const { return form_; }
FunctionForm form2() const { return form2_; }
ARSimplex3D* simplex() const { return simplex_; }
ARSimplex3D* simplex2() const { return simplex2_; }
std::ostream& operator<<(std::ostream& out) const { return (out << "(" << form_ << ", " << simplex_ << "), ("
<< form2_ << ", " << simplex2_ << ")"); }
private:
FunctionForm form_, form2_; // the function is form_ - form2_
ARSimplex3D *simplex_, *simplex2_;
};
std::ostream&
operator<<(std::ostream& out, const ARFunction& f)
{ return f.operator<<(out); }
/**
* Function kernel specialized at solving the kinds of functions involved in
* ARVineyard construction. We cannot use a polynomial kernel (which includes
* rational functions) that we already have because not all involved functions
* are rational.
*/
class ARFunctionKernel
{
public:
typedef double FieldType;
typedef FieldType RootType;
typedef std::stack<RootType> RootStack;
typedef ARSimplex3D::RealValue SimplexFieldType;
typedef ARFunction Function;
typedef Function::FunctionForm FunctionForm;
public:
static void solve(const Function& f, RootStack& stack);
static RootType root(RootType r) { return r; }
static RootType root(SimplexFieldType r) { return CGAL::to_double(r); }
static int sign_at(const Function& f, RootType r);
static RootType between(RootType r1, RootType r2) { return (r1 + r2)/2; }
static int sign_at_negative_infinity(const Function& f);
static FieldType value_at(const Function& f, RootType v);
};
#include "ar-function-kernel.hpp"
#endif