Changed implementation of WeightedRips to store simplex values (max distance between simplices' vertices) as an invisible layer on top of each simplex object, so that the data() field of WeightedRips has been freed for use by the users again.
find_package (PythonLibs)
link_libraries (${PYTHON_LIBRARIES})
include_directories (${PYTHON_INCLUDE_PATH})
link_libraries (${Boost_PYTHON_LIBRARY})
# currently can't build bindings with counters support, eventually FIXME
remove_definitions (-DCOUNTERS)
set (sources
dionysus.cpp
filtration.cpp
chain.cpp
static-persistence.cpp
simplex.cpp
zigzag-persistence.cpp
rips.cpp
)
set (bindings_libraries ${libraries})
if (CGAL_FOUND)
set (sources ${sources}
alphashapes3d.cpp
alphashapes2d.cpp)
add_definitions (${CGAL_CXX_FLAGS_INIT})
include_directories (${CGAL_INCLUDE_DIRS})
link_libraries (${CGAL_LIBRARY})
else (CGAL_FOUND)
message(STATUS "CGAL not found, alphashape bindings will not be built")
endif (CGAL_FOUND)
add_library (_dionysus SHARED ${sources})
target_link_libraries (_dionysus ${libraries})
# Python files and the symlink
add_custom_target (dionysus ALL
${CMAKE_COMMAND} -E copy_directory ${CMAKE_CURRENT_SOURCE_DIR}/dionysus ${CMAKE_CURRENT_BINARY_DIR}/dionysus
DEPENDS dionysus/__init__.py
dionysus/distances.py
)
get_target_property (_dionysus_location _dionysus LOCATION)
add_custom_target (dionysus-link ALL
${CMAKE_COMMAND} -E create_symlink ${_dionysus_location} ${CMAKE_CURRENT_BINARY_DIR}/dionysus/_dionysus.so
DEPENDS _dionysus)