| Wed, 27 Feb 2008 07:57:45 -0500 |
Dmitriy Morozov |
Merged upstream changes (to get boost::program_options setup in CMake)
ar
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files
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| Mon, 25 Feb 2008 16:54:34 -0500 |
Dmitriy Morozov |
Merged in fitness branch
dev
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files
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| Wed, 27 Feb 2008 07:56:26 -0500 |
Dmitriy Morozov |
ar-vinyeard compiles and runs:
ar
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files
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| Tue, 26 Feb 2008 18:25:27 -0500 |
Dmitriy Morozov |
Added intostring() issue (#89a)
ar
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files
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| Tue, 26 Feb 2008 16:45:25 -0500 |
Dmitriy Morozov |
KineticSort can deal with equal trajectories:
ar
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files
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| Tue, 26 Feb 2008 16:15:12 -0500 |
Dmitriy Morozov |
Fixed UPolynomial<T>::sign_at_negative_infinity() + Simulator::add()
ar
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files
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| Tue, 26 Feb 2008 08:02:56 -0500 |
Dmitriy Morozov |
Added and fixed CGAL debugging problem (issue #c42)
ar
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files
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| Mon, 25 Feb 2008 11:43:33 -0500 |
Dmitriy Morozov |
Added EventQueue efficiency issue (#ebd)
ar
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files
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| Mon, 25 Feb 2008 04:37:49 -0500 |
Dmitriy Morozov |
Initial commit of KineticSort-based ARVineyard
ar
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files
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| Mon, 25 Feb 2008 04:33:13 -0500 |
Dmitriy Morozov |
Issue #cd7: incorrect UPolynomial<double>::sign_at()
ar
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files
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| Fri, 22 Feb 2008 18:29:43 -0500 |
Dmitriy Morozov |
Fixed Simulator not processing events correctly
ar
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files
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| Fri, 22 Feb 2008 13:06:40 -0500 |
Dmitriy Morozov |
Fixed segfault in test-kinetic-sort (#b5d)
ar
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files
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| Thu, 21 Feb 2008 06:49:06 -0500 |
Dmitriy Morozov |
Added segfault in test-kinetic-sort issue
ar
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files
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| Thu, 21 Feb 2008 04:50:09 -0500 |
Dmitriy Morozov |
Changed PolynomialKernel to FunctionKernel
ar
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files
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| Tue, 19 Feb 2008 09:10:51 -0500 |
Dmitriy Morozov |
Changed geometry to RLog-based logging and counters
ar
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files
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| Tue, 19 Feb 2008 07:26:01 -0500 |
Dmitriy Morozov |
Added class groups to Doxygen documentation
ar
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files
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| Tue, 19 Feb 2008 06:56:49 -0500 |
Dmitriy Morozov |
Merged in changes from master
ar
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files
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| Tue, 19 Feb 2008 06:51:23 -0500 |
Dmitriy Morozov |
Commit to merge in changes from master.
ar
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files
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| Fri, 24 Aug 2007 16:58:25 -0400 |
Dmitriy Morozov |
Fixed handling of degeneracies in KineticSort, Simulator is aware of the sign of the RationalFunction
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files
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| Fri, 17 Aug 2007 15:08:27 -0400 |
Dmitriy Morozov |
Merged CGAL 3.3 changes with the work on ARVineyard
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files
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| Fri, 17 Aug 2007 15:04:28 -0400 |
Dmitriy Morozov |
Work in progress on ARVineyard and KineticSort. Commit to merge in CGAL 3.3 changes.
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files
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| Wed, 15 Aug 2007 11:52:17 -0400 |
Dmitriy Morozov |
tests/geometry now match the include/ breakup and are switched to CMake
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files
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| Fri, 04 Apr 2008 16:17:28 -0400 |
Dmitriy Morozov |
Fixed the mislabeled Case 1.2
dev
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files
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| Wed, 26 Mar 2008 05:53:03 -0400 |
Dmitriy Morozov |
Added Poincare sphere example
dev
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files
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| Wed, 26 Mar 2008 05:52:39 -0400 |
Dmitriy Morozov |
Fixed to compile with GCC 4.3
dev
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files
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| Wed, 19 Mar 2008 12:43:33 -0400 |
Dmitriy Morozov |
Fixed CGAL assertion failures in alphashapes (explicitly checking for infinite simplices)
dev
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files
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| Fri, 14 Mar 2008 20:21:15 -0400 |
Dmitriy Morozov |
Added ability to disable the use of DSR-PDB (disabled by default)
dev
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files
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| Fri, 14 Mar 2008 18:35:41 -0400 |
Dmitriy Morozov |
Normalized persistence (#cff) + unpaired simplices output pairs with 0
fitness
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files
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| Mon, 25 Feb 2008 16:24:29 -0500 |
Dmitriy Morozov |
avida-landscape: added MST (fixing #919) + switched to boost::program_options
fitness
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files
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| Mon, 25 Feb 2008 04:39:27 -0500 |
Dmitriy Morozov |
avida-landscape pairs maxima of fitness rather than minima
fitness
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files
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| Sun, 17 Feb 2008 16:32:33 -0500 |
Dmitriy Morozov |
avida-landscape computes 0-dimensional persistence of the fitness landscape
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files
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| Sun, 17 Feb 2008 09:16:30 -0500 |
Dmitriy Morozov |
Merged the branch resulting from the upstream pull
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files
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| Sun, 17 Feb 2008 09:16:00 -0500 |
Dmitriy Morozov |
Started examples/fitness/avida-landscape
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files
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| Thu, 27 Dec 2007 00:00:00 -0500 |
Dmitriy Morozov |
Added initial Avida code (computes 0-dimensional persistence of the hamming distance function)
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files
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| Sun, 17 Feb 2008 08:47:20 -0500 |
Dmitriy Morozov |
LowerStarFiltration provides a base class for VertexType
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files
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| Sun, 17 Feb 2008 08:23:55 -0500 |
Dmitriy Morozov |
Added issues
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files
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| Sun, 25 Nov 2007 09:12:36 -0500 |
Dmitriy Morozov |
Don't print a line if counters unused; in example/alphashapes converted cout to rInfo
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files
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| Thu, 11 Oct 2007 11:46:00 -0400 |
Dmitriy Morozov |
Added 2D alpha shape filtration example
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files
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| Thu, 20 Sep 2007 08:02:49 -0400 |
Dmitriy Morozov |
Added ability to not store trails in pair_simplices() computation
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files
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| Thu, 20 Sep 2007 07:31:40 -0400 |
Dmitriy Morozov |
Added counter of total trail and cycle lengths. Added CountBy.
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files
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| Tue, 18 Sep 2007 05:45:19 -0400 |
Dmitriy Morozov |
Minor fixed to CMake (fixed include directory for rlog)
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files
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| Tue, 18 Sep 2007 05:45:04 -0400 |
Dmitriy Morozov |
Removed sz from Cycle (size is kept track of in the parent)
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files
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| Sat, 15 Sep 2007 14:31:36 -0400 |
Dmitriy Morozov |
Counter omits color codes only if connected to a TTY
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files
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| Sat, 15 Sep 2007 04:42:15 -0400 |
Dmitriy Morozov |
Updated README to reflect changes to the logging
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files
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| Fri, 14 Sep 2007 17:32:11 -0400 |
Dmitriy Morozov |
Changes to CMakeLists:
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files
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| Fri, 14 Sep 2007 06:34:43 -0400 |
Dmitriy Morozov |
Added counters to Cycle, added timestamp to Counter output
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files
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| Fri, 14 Sep 2007 05:51:51 -0400 |
Dmitriy Morozov |
Fixed logging and counters
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files
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| Thu, 13 Sep 2007 10:31:39 -0400 |
Dmitriy Morozov |
Counters straightened out (at least the code compiles)
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files
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| Thu, 13 Sep 2007 04:43:33 -0400 |
Dmitriy Morozov |
Merged in changes from master
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files
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| Thu, 13 Sep 2007 04:42:39 -0400 |
Dmitriy Morozov |
Changed counters and added setup for new logging. Everything but tests is broken.
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files
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| Wed, 12 Sep 2007 09:40:23 -0400 |
Dmitriy Morozov |
Merged in README changes from master
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files
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| Wed, 12 Sep 2007 09:39:34 -0400 |
Dmitriy Morozov |
Changed SimplexWithVertices<V>::VertexContainer to std::vector<V> from std::set<V>
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files
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| Wed, 12 Sep 2007 08:28:33 -0400 |
Dmitriy Morozov |
Fixed typos in README
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files
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| Thu, 16 Aug 2007 17:12:52 -0400 |
Dmitriy Morozov |
Fixed to compile with CGAL 3.3
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files
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| Wed, 15 Aug 2007 11:39:34 -0400 |
Dmitriy Morozov |
Merged geometry and include breakup with AR vineyard
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files
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| Wed, 15 Aug 2007 11:25:35 -0400 |
Dmitriy Morozov |
Initial AR vineyard commit (CGAL based, and not working)
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changeset |
files
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| Tue, 14 Aug 2007 17:15:08 -0400 |
Dmitriy Morozov |
Broke include/ into separate topology/ and utilities/ subdirectories
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files
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| Sun, 01 Jul 2007 00:00:00 -0400 |
Dmitriy Morozov |
Initial geometry commit
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changeset |
files
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| Wed, 23 May 2007 10:48:04 -0400 |
Dmitriy Morozov |
Added Cech complex example
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changeset |
files
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| Wed, 07 Feb 2007 14:00:39 -0500 |
Dmitriy Morozov |
Switched counters to macros
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changeset |
files
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