Debugged ZigzagPersistence (having added heavier consistency checking) * Added DEBUG_CONTAINERS option (uses std::__debug::* containers for chains and in ZigzagPersistence) * Added SizeStorage specialization for std::deque<T> * ZigzagPersistence got a lot more consistency checking (in debug mode only, which now crawls); as a result it's been debugged (running on non-trivial examples) * examples/rips/rips-zigzag takes command-line options * added ChainWrapper::clear() * added Simplex::VertexDimensionComparison * added PairwiseDistances class (for computing distances between points in a container according to a distance functor)

link_libraries              (${Boost_PYTHON_LIBRARY})
include_directories         ("/usr/include/python2.6")
link_directories            ("/usr/lib/python2.6")
add_library                 (_dionysus SHARED 
                                                dionysus.cpp 
                                                filtration.cpp
                                                chain.cpp
                                                static-persistence.cpp
                                                simplex.cpp)
target_link_libraries       (_dionysus ${libraries})