Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
* added program options to pdbdistance-vineyard
* pdbdistance-vineyard takes frame list in a file
* more logging
* verification of pairing after vertex transpositions (commented out)
From: Dmitriy Morozov <morozov@cs.duke.edu>
Date: Wed, 19 Mar 2008 13:17:30 -0400
Subject: Fixed for ar-vineyard
Message-Id: <c420501cc5285bbc-feb676745fc16b8c-artemis@metatron>
References: <c420501cc5285bbc-8f74ccde6b3f0bea-artemis@metatron>
In-Reply-To: <c420501cc5285bbc-8f74ccde6b3f0bea-artemis@metatron>
Fixed for ar-vineyard.