Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
* added program options to pdbdistance-vineyard
* pdbdistance-vineyard takes frame list in a file
* more logging
* verification of pairing after vertex transpositions (commented out)
#ifndef __PYTHON_ZIGZAG_PERSISTENCE_H__
#define __PYTHON_ZIGZAG_PERSISTENCE_H__
#include <topology/cohomology-persistence.h>
#include <boost/python.hpp>
#include "birthid.h"
namespace dionysus {
namespace python {
typedef CohomologyPersistence<BirthID> CohomPersistence;
} } // namespace dionysus::python
#endif