Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
* added program options to pdbdistance-vineyard
* pdbdistance-vineyard takes frame list in a file
* more logging
* verification of pairing after vertex transpositions (commented out)
#ifndef __PYTHON_FILTRATION_H__
#define __PYTHON_FILTRATION_H__
#include <topology/filtration.h>
#include <boost/python.hpp>
#include "simplex.h"
#include "utils.h" // for ListRandomAccessIterator
namespace bp = boost::python;
namespace dionysus {
namespace python {
typedef Filtration<SimplexVD> PythonFiltration;
} } // namespace dionysus::python
#endif