Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
* added program options to pdbdistance-vineyard
* pdbdistance-vineyard takes frame list in a file
* more logging
* verification of pairing after vertex transpositions (commented out)
set (targets
test-set-iterators
test-consistencylist
test-orderlist)
if (counters)
set (targets ${targets} test-counters)
endif (counters)
foreach (t ${targets})
add_executable (${t} ${t}.cpp)
target_link_libraries (${t} ${libraries})
endforeach (t ${targets})