Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
* added program options to pdbdistance-vineyard
* pdbdistance-vineyard takes frame list in a file
* more logging
* verification of pairing after vertex transpositions (commented out)
set (diagram-viewerSources
diagram.cpp
diagram-viewer-main.cpp)
set (diagram-viewerHeaders
diagram.h)
qt4_wrap_cpp (diagram-viewerMocSources ${diagram-viewerHeaders})
set (libraries ${libraries}
${Boost_SERIALIZATION_LIBRARY}
${Boost_PROGRAM_OPTIONS_LIBRARY}
${QT_LIBRARIES})
add_executable (diagram-viewer ${diagram-viewerSources}
${diagram-viewerMocSources})
target_link_libraries (diagram-viewer ${libraries})