2009-11-06 Dmitriy Morozov Added arbitrary coefficients in boundaries (to C++ and Python) + cleaned up CohomologyPersistence.add overloading in Python dev
2009-10-28 Dmitriy Morozov Added image persistence functionality to CohomologyPersistence dev
2009-10-23 Dmitriy Morozov Added draw.py under tools/draw-diagram dev
2009-10-23 Dmitriy Morozov Added link to CVXOPT in get-build-install documentation + progress bar to rips-pairwise-cohomology dev
2009-10-21 Dmitriy Morozov Fixed a typo in documentation + added a warning and a tip about GCC 4.2 on a Mac dev
2009-08-31 mridul The if-else cases in lsqr.py were not exhaustive. They become exhaustive by changing ab > aa to ab >= aa. dev
2009-08-31 Dmitriy Morozov Removed Qt4 requirement + added link to download and tutorial to the front page of the documentation dev
2009-08-21 Dmitriy Morozov Exposed store argument to CohomologyPersistence.add() in Python dev
2009-08-19 Dmitriy Morozov cocycle.py uses vertex list, and does not make any assumptions about the vertex-simplex order dev
2009-08-13 Dmitriy Morozov Consistency zigzag outputs intervals supported over a single complex dev
2009-08-13 Camille Wormser explicitely converts a Dimension (short int) into a size_t, for removing a warning dev
2009-08-12 Camille Wormser Removing unused parameter names in order to avoid warnings dev
2009-08-12 Dmitriy Morozov make-zigzag-subsamples.py doesn't output the union, rips-consistency-zigzag.cpp fixed show_progress dev
2009-08-10 Dmitriy Morozov Fixed bugs in cocycle.py introduced when rips-pairwise-cohomology.py was originally added dev
2009-08-10 Dmitriy Morozov Fixed bugs in rips-pairwise-cohomology.py whose origin is unclear to me dev
2009-08-05 Dmitriy Morozov Merged in Chris' changes dev
2009-08-04 Christos Mantoulidis Modified cohomology code (unweighted and weighted) so that it doesn't use std::map for boundary computations, which should optimize memory usage. dev
2009-08-04 Christos Mantoulidis Changed implementation of WeightedRips to store simplex values (max distance between simplices' vertices) as an invisible layer on top of each simplex object, so that the data() field of WeightedRips has been freed for use by the users again. dev
2009-07-28 Christos Mantoulidis Added rips-weighted-cohomology, and channeled WeightedRips logging to the same channel as Rips dev
2009-07-28 Christos Mantoulidis Merged upstream dev
2009-07-28 Christos Mantoulidis Modified WeightedRips::generate() to incorporate the simplex-appearance-value computation (before it would have to be done explicitly by the user by a for-loop after the call to generate()) dev
2009-07-28 Christos Mantoulidis added logging to WeightedRips (still needs debugging) dev
2009-07-14 Christos Mantoulidis Updated weighted rips libraries to make use of OOP--now WeightedRips inherits from Rips. It is possible that logging for WeightedRips does not work. dev
2009-07-02 Christos Mantoulidis Added weighted rips code and libraries dev
2009-08-04 Dmitriy Morozov Simplices are deleted from the complex after removal in triangle-zigzag.py + touched up documentation (to mention CohomologyPersistence better) dev
2009-07-28 Dmitriy Morozov Consistency zigzag outputs intervals for dimensions less than the skeleton dimension only dev
2009-07-30 Dmitriy Morozov Switched PairwiseDistances in Python bindings to C++ dev
2009-07-30 Dmitriy Morozov Added Python bindings for CohomologyPersistence (+ example + documentation) dev
2009-07-24 Dmitriy Morozov Minor changes in distances.py + rips-pairwise.py wrapped into a main() function dev
2009-06-17 Dmitriy Morozov Disable alphashapes in Python bindings if no CGAL dev
2009-05-18 Dmitriy Morozov Made ListRandomAccessIterator generic with respect to value, and moved it to utils.h dev
2009-07-24 Dmitriy Morozov Cleaner output in rips-pairwise.cpp + added make-zigzag-subsamples.py + added lsfiltration.py dev
2009-07-09 Dmitriy Morozov Fixed plot.py in tools/plot-values dev
2009-05-15 Dmitriy Morozov In documentation put contents into sidebar dev
2009-07-09 Dmitriy Morozov Documentation for parametrization using persistent cohomology dev
2009-07-09 Dmitriy Morozov Rips pairwise cohomology produces output necessary for 1-cocycle parametrization dev
2009-07-09 Dmitriy Morozov Added field arithmetic to CohomologyPersistence (Zp + Q) dev
2009-05-14 Dmitriy Morozov Moved PairwiseDistances and ExplicitDistances into include/geometry/distances.h dev
2009-05-14 Dmitriy Morozov read_points() does not need ambient dimension and ignores lines starting with '#' dev
2009-05-11 Dmitriy Morozov Added documentation; for now mostly for the Python bindings dev
2009-05-07 Dmitriy Morozov Touch up to compile with GCC 4.4 dev
2009-04-29 Dmitriy Morozov Cleaned up simplex comparison functions, rip-pairwise.py outputs a diagram, auxilliary add_simplices() + remove_simplices() for zigzags dev
2009-04-16 Dmitriy Morozov Alphashapes and Python bindings dev
2009-04-15 Dmitriy Morozov Placed all Python bindings code into dionysus::python namespace dev
2009-04-14 Dmitriy Morozov Cleaned up Python bindings to restore functionality: dev
2009-04-14 Dmitriy Morozov Renamed header files in bindings/python to get rid of the "python-" prefix dev
2009-04-14 Dmitriy Morozov Changes in Python Bindings: dev
2009-04-11 Dmitriy Morozov Added Python bindings for the Rips complex + an example dev
2009-05-01 Dmitriy Morozov Cleaned up traits (chain and container) for static- and dynamic-persistence dev
2009-05-01 Dmitriy Morozov Added tools/extract-diagram + minor fixes dev
2009-04-10 Dmitriy Morozov Added intrusive containers issue and issue filters dev
2009-04-09 Dmitriy Morozov Moved l2distance.h into include/geometry dev
2009-04-09 Dmitriy Morozov Added categories to some of the issues dev
2009-04-09 Dmitriy Morozov Fixed distance to diagonal calculation + added stand-alone bottleneck distance tool dev
2009-03-25 Dmitriy Morozov Added ZigzagPersistence::is_alive() + consistency zigzag outputs betti 1 at each stage dev
2009-03-24 Dmitriy Morozov Added consistency zigzag dev
2009-03-23 Dmitriy Morozov Merged in cohomology branch dev
2009-02-27 Dmitriy Morozov Added CohomologyPersistence and Rips pairwise distances computation dev
2009-03-22 Dmitriy Morozov Added DynamicPersistenceChains (no dynamic part yet) dev
2009-02-03 Dmitriy Morozov Updated Rips zigzags dev
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