2010-07-02 |
Aravindakshan Babu |
Added code to expose the persistence_diagram class, the bottleneck_distance function and the point class to python.
dev
|
changeset |
files
|
2010-07-15 |
Dmitriy Morozov |
Merged docs with upstream
dev
|
changeset |
files
|
2010-07-15 |
Dmitriy Morozov |
Removed the warning about compiler versions (seems unnecessary after Andrew's fixes)
dev
|
changeset |
files
|
2010-07-12 |
Dmitriy Morozov |
Fixed path for lsfiltration.py
dev
|
changeset |
files
|
2010-07-06 |
Dmitriy Morozov |
Bug in the tutorial: simplices = [] -> simplices = Filtration()
dev
|
changeset |
files
|
2010-04-13 |
Dmitriy Morozov |
More typos in the docs
dev
|
changeset |
files
|
2010-04-13 |
Dmitriy Morozov |
Fixed a link: dionysis -> dionysus
dev
|
changeset |
files
|
2010-04-20 |
Dmitriy Morozov |
Andrew Yarmola's fix to the in-class intialization syntax in OrderList<T>
dev
|
changeset |
files
|
2010-03-09 |
Dmitriy Morozov |
Added Persistence::initialize(f) + fixed minor bug LinearKernel::sign_at_negative_infinity()
dev
|
changeset |
files
|
2010-03-06 |
Dmitriy Morozov |
Added insert-at-the-end optimization for CohomologyPersistence::add_cocycle()
dev
|
changeset |
files
|
2010-03-05 |
Dmitriy Morozov |
Count cocycles in CohomologyPersistence
dev
|
changeset |
files
|
2010-02-24 |
Mikael Vejdemo Johansson |
Andrew Yarmola's compilation fix for MacOSX.
dev
|
changeset |
files
|
2010-02-23 |
Dmitriy Morozov |
Removed unused instrumentation of cohomology and unnecessary includes
dev
|
changeset |
files
|
2010-02-09 |
Dmitriy Morozov |
Removed reference to reference in ThreeOutcomeComparison
dev
|
changeset |
files
|
2010-02-08 |
Dmitriy Morozov |
Made EventQueue into a binary heap (for efficiency and sanity)
dev
|
changeset |
files
|
2010-02-07 |
Dmitriy Morozov |
Replaced list with multi_index representation in EventQueue making it more efficient
dev
|
changeset |
files
|
2010-02-07 |
Dmitriy Morozov |
Switched to internal KineticSort
dev
|
changeset |
files
|
2010-02-05 |
Dmitriy Morozov |
Added linear kernel for my own KineticSort
dev
|
changeset |
files
|
2010-02-05 |
Dmitriy Morozov |
Commented out QField to get rid of the artifical dependence on GMP
dev
|
changeset |
files
|
2010-02-05 |
Dmitriy Morozov |
Fixed non-copyable temporary bug
dev
|
changeset |
files
|
2010-02-03 |
Dmitriy Morozov |
Fixed the duplicates (degeneracy) and another assertion problem in LSVineyard
dev
|
changeset |
files
|
2010-02-03 |
Dmitriy Morozov |
Removed a buggy assertion in LSVineard::transpose_vertices() (j points at the end() when moving the last simplex of the filtration)
dev
|
changeset |
files
|
2010-02-03 |
Dmitriy Morozov |
StaticPersistence::pair_simplices() has an option to not display progress (LSVineyard uses it during consistency checking)
dev
|
changeset |
files
|
2010-01-26 |
Dmitriy Morozov |
Added rips-explicit-cohomology
dev
|
changeset |
files
|
2010-01-26 |
Dmitriy Morozov |
Moved lsfiltration.py into examples/pl-functions + added lscubes.py example (cubical lower-star filtration)
dev
|
changeset |
files
|
2010-01-12 |
Dmitriy Morozov |
Fixed Python constructor of CohomologyPersistence + minor changes to cocycle.py
dev
|
changeset |
files
|
2010-01-11 |
Dmitriy Morozov |
vertex_coface -> vertex_cofaces in Rips documentation (in Python)
dev
|
changeset |
files
|
2010-01-09 |
Dmitriy Morozov |
Henry Adams' fixes to python/dionysus/zigzag.py + added CohomologyPersistence.show_cocycles method
dev
|
changeset |
files
|
2010-01-07 |
Dmitriy Morozov |
CohomologyPersistence::add returns the dying cocycle
dev
|
changeset |
files
|
2010-01-05 |
Dmitriy Morozov |
Check Boost version in include/utilities/property-maps.h + minor changes to cocycle.py
dev
|
changeset |
files
|
2009-12-31 |
Dmitriy Morozov |
Added pl-vineyard documentation
dev
|
changeset |
files
|
2009-12-25 |
Dmitriy Morozov |
Fixed a serious bug in DynamicPersistenceTrails + LSVineyard sorts filtration by attachment + miscellanea:
dev
|
changeset |
files
|
2009-12-20 |
Dmitriy Morozov |
Moved files around: lsvineyard.h -> include/topology, examples/grid -> examples/pl-functions
dev
|
changeset |
files
|
2009-12-20 |
Dmitriy Morozov |
Merged Vineyards code changes with the main development line
dev
|
changeset |
files
|
2009-12-20 |
Dmitriy Morozov |
Python bindings work again
dev
|
changeset |
files
|
2009-12-16 |
Dmitriy Morozov |
Created pl-vineyard.cpp to compute vineyards given a complex and a sequence of values at each vertex
dev
|
changeset |
files
|
2009-12-16 |
Dmitriy Morozov |
Resurrected vineyard code:
dev
|
changeset |
files
|
2009-12-03 |
Dmitriy Morozov |
Made storing negative simplices in StaticPersistence parameter-based, so that DynamicPersistence works again
dev
|
changeset |
files
|
2009-12-02 |
Dmitriy Morozov |
StaticPersistence operates on chains consisting of only positive simplices
dev
|
changeset |
files
|
2009-12-02 |
Dmitriy Morozov |
alphashapes3d.cpp measures persistence time
dev
|
changeset |
files
|
2009-11-29 |
Dmitriy Morozov |
Fixed DynamicPersistenceTrails::PairingTrailsVisitor to match the changes in StaticPersistence::PairVisitor
dev
|
changeset |
files
|
2009-11-29 |
Dmitriy Morozov |
Instrumented code for counting:
dev
|
changeset |
files
|
2009-11-06 |
Dmitriy Morozov |
Added arbitrary coefficients in boundaries (to C++ and Python) + cleaned up CohomologyPersistence.add overloading in Python
dev
|
changeset |
files
|
2009-10-28 |
Dmitriy Morozov |
Added image persistence functionality to CohomologyPersistence
dev
|
changeset |
files
|
2009-10-23 |
Dmitriy Morozov |
Added draw.py under tools/draw-diagram
dev
|
changeset |
files
|
2009-10-23 |
Dmitriy Morozov |
Added link to CVXOPT in get-build-install documentation + progress bar to rips-pairwise-cohomology
dev
|
changeset |
files
|
2009-10-21 |
Dmitriy Morozov |
Fixed a typo in documentation + added a warning and a tip about GCC 4.2 on a Mac
dev
|
changeset |
files
|
2009-08-31 |
mridul |
The if-else cases in lsqr.py were not exhaustive. They become exhaustive by changing ab > aa to ab >= aa.
dev
|
changeset |
files
|
2009-08-31 |
Dmitriy Morozov |
Removed Qt4 requirement + added link to download and tutorial to the front page of the documentation
dev
|
changeset |
files
|
2009-08-21 |
Dmitriy Morozov |
Exposed store argument to CohomologyPersistence.add() in Python
dev
|
changeset |
files
|
2009-08-19 |
Dmitriy Morozov |
cocycle.py uses vertex list, and does not make any assumptions about the vertex-simplex order
dev
|
changeset |
files
|
2009-08-13 |
Dmitriy Morozov |
Consistency zigzag outputs intervals supported over a single complex
dev
|
changeset |
files
|
2009-08-13 |
Camille Wormser |
explicitely converts a Dimension (short int) into a size_t, for removing a warning
dev
|
changeset |
files
|
2009-08-12 |
Camille Wormser |
Removing unused parameter names in order to avoid warnings
dev
|
changeset |
files
|
2009-08-12 |
Dmitriy Morozov |
make-zigzag-subsamples.py doesn't output the union, rips-consistency-zigzag.cpp fixed show_progress
dev
|
changeset |
files
|
2009-08-10 |
Dmitriy Morozov |
Fixed bugs in cocycle.py introduced when rips-pairwise-cohomology.py was originally added
dev
|
changeset |
files
|
2009-08-10 |
Dmitriy Morozov |
Fixed bugs in rips-pairwise-cohomology.py whose origin is unclear to me
dev
|
changeset |
files
|
2009-08-05 |
Dmitriy Morozov |
Merged in Chris' changes
dev
|
changeset |
files
|
2009-08-04 |
Christos Mantoulidis |
Modified cohomology code (unweighted and weighted) so that it doesn't use std::map for boundary computations, which should optimize memory usage.
dev
|
changeset |
files
|
2009-08-04 |
Christos Mantoulidis |
Changed implementation of WeightedRips to store simplex values (max distance between simplices' vertices) as an invisible layer on top of each simplex object, so that the data() field of WeightedRips has been freed for use by the users again.
dev
|
changeset |
files
|